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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920290.1_cds_XP_016469454.1_61995
CDS Infomation

[gene=LOC107791827] [db_xref=GeneID:107791827] [protein=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like] [protein_id=XP_016469454.1] [location=complement(join(50230..50598,50687..50888,50976..51226,51347..51452,51530..51696,51786..51866,51988..52151,52237..52628,52696..52823,53152..53239,53328..53677))] [gbkey=CDS]
Sequence

ATGGCATCTCACATTGTTGGATACCCTCGTATGGGCCCAAAGAGAGAGCTCAAATTTGCT
CTCGAGTCTTTCTGGGATGGAAAGAGCAGTGCCGAGGACTTGAAGAAGGTGTCTGCTGAC
CTCAGGTCATCTATCTGGAAACAGATGGCTGATGCTGGCATTAAGTATATTCCCAGCAAC
ACCTTCTCTTACTATGATCAAGTGCTCGACACAACCGCAATGCTTGGTGCCGTCCCTTCT
AGGTACAACTGGACCGGTGGTGAGATCGGGTTTGACACTTACTTCTCCATGGCCAGAGGA
AACGCCTCTGTCCCTGCAATGGAGATGACAAAGTGGTTTGATACCAACTACCACTTCATT
GTCCCTGAGTTGGGACCTGATGTTAACTTTTCTTATGCTTCTCACAAGGCAGTAGATGAG
TACAAAGAGGCCAAGGGGCTTGGAGTAGATACTGTTCCAGTACTTGTTGGTCCAGTTTCA
TATTTGTTGCTGTCCAAACCTGCTAAGGGTGTTGAGAAATCTTTCCCCCTTTTGTCACTT
CTGGACAAAATCCTTCCAATCTACAAGGAAGTTATTGCGGAGTTGAAGGCAGCTGGCGCT
TCTTGGATTCAGTTTGACGAGCCTACACTTGTGTTGGATCTAGAGGCTCTCAAATTGGAA
GCATTCACTAAGGCCTATGCTGAGTTGGAGTCATCTCTATCTGGCCTCAATGTTATCGTT
GAGACCTACTTTGCTGATGTTCCTGCCGAGGCATTCAAAACCCTCACTGCTTTGAAAGGA
GTTACCGGCTTTGGTTTTGACTTGGTCCGTGGAACTCAGGCCCTCGATTTAATCAAGGGT
GGTTTCCCTTCCGGCAAGTACTTGTTTGCTGGAGTGGTTGACGGGAGAAACATTTGGGCT
AATGATCTTGCTGCATCTCTTAACCTCCTGCAATCTCTTGAGGGCATTGTAGGAAAAGAC
AAGCTTGTCGTCTCTACATCTTGCTCCCTACTCCACACTGCTGTTGATCTGGTCAACGAG
CCAAAGCTAGACAATGAAATCAAATCATGGCTCGCATTTGCTGCCCAAAAGGTTGTTGAA
GTGAATGCTTTAGCCAAGGCATTGGCTGGTACCAAGGATGAGGCATTTTTCTCTGCTAAT
GCTGCTGCTCAAGCTTCCAGAAAGTCCTCCCCAAGAGTGACAAATGAAGCTGTTCAAAAG
GCTTCCGCTGCTCTTCAAGGATCTGACCACCGCCGGGCTACAAATGTTAGTGCTAGACTT
GATGCCCAACAACAGAAACTTAACCTACCAATTCTGCCTACAACCACCATTGGATCCTTC
CCTCAGACAGTGGAGCTTAGAAGAGTTCGTCGTGAATACAAGGCCAAGAAGATCTCTGAG
GAGGAATATGTTAAAGCCATCAAGGAGGAAATCAAGAAGGTTGTCGATCTCCAAGAAGAG
CTTGACATTGATGTCTTGGTTCACGGAGAGCCTGAGAGGAACGATATGGTTGAGTACTTT
GGAGAGCAGCTATCTGGTTTTGCCTTCACTGCTAATGGATGGGTTCAATCGTATGGATCT
CGATGTGTGAAGCCACCTATCATCTATGGTGATGTGAGCCGCCCAAAGCCAATGACTGTC
TTCTGGTCCTCAGCTGCTCAAAGCATGACCAAGAGGCCAATGAAGGGAATGCTTACCGGC
CCTGTCACCATTCTCAACTGGTCTTTTGTCAGAAATGACCAGCCAAGGTTTGAGACCTGC
TACCAGATTGCTTTGGCCATTAAGGATGAAGTGGAGGATTTGGAGAAGGCAGGAATCACT
GTGATCCAAATCGATGAAGCTGCTTTGAGAGAAGGCTTGCCTCTGAGGAAGTCTGAACAC
GCATTCTACTTGAACTGGGCTGTCCACTCCTTCAGAATCACCAACGTCGGTATCCAGGAC
ACTACACAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCCATC
ATAGACATGGATGCGGATGTGATCACTATTGAGAACTCACGTTCTGATGAGAAACTCCTC
TCAGTTTTCAGGGAGGGAGTGAAGTACGGAGCTGGCATTGGTCCCGGTGTCTATGACATC
CACTCTCCAAGAATACCATCCACAGAGGAGATAGCTGATAGAGTTAACAAGATGCTTGCA
GTTCTTGACACCAACATCTTGTGGGTCAACCCCGACTGTGGTCTCAAGACTCGCAAGTAC
ACCGAGGTGAAACCAGCCCTGCAAAACATGGTGTCTGCAGCCAAGGCAATCCGCACTCAG
CTCGCCAGTGCCAAGTGA

Peptide Sequence

PEP ID

XP_016469454.1
PEP Infomation

PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Nicotiana tabacum]
Sequence

MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVSADLRSSIWKQMADAGIKYIPSN
TFSYYDQVLDTTAMLGAVPSRYNWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFI
VPELGPDVNFSYASHKAVDEYKEAKGLGVDTVPVLVGPVSYLLLSKPAKGVEKSFPLLSL
LDKILPIYKEVIAELKAAGASWIQFDEPTLVLDLEALKLEAFTKAYAELESSLSGLNVIV
ETYFADVPAEAFKTLTALKGVTGFGFDLVRGTQALDLIKGGFPSGKYLFAGVVDGRNIWA
NDLAASLNLLQSLEGIVGKDKLVVSTSCSLLHTAVDLVNEPKLDNEIKSWLAFAAQKVVE
VNALAKALAGTKDEAFFSANAAAQASRKSSPRVTNEAVQKASAALQGSDHRRATNVSARL
DAQQQKLNLPILPTTTIGSFPQTVELRRVRREYKAKKISEEEYVKAIKEEIKKVVDLQEE
LDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTV
FWSSAAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGIT
VIQIDEAALREGLPLRKSEHAFYLNWAVHSFRITNVGIQDTTQIHTHMCYSNFNDIIHSI
IDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRVNKMLA
VLDTNILWVNPDCGLKTRKYTEVKPALQNMVSAAKAIRTQLASAK

Transcript Sequence

Gene sequence data has not been registered.